disktree joins the base packages and the preinstalls, so Remove and
Install Preinstalls take it out and bring it back with the rest. A
migration installs it on existing systems, unless the preinstalls were
removed. The manual gets a GUIs entry, pointing at Disk Usage for the
terminal version.
Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
With the venv active, a gateway started by hand is `python -m hermes_cli.main gateway run`: the interpreter is bare, the executable resolves outside the runtime, and no runtime path is on the command line, so the removal took it for a stranger and refused over the files it holds rather than closing it. Hermes's own package named with -m is the program.
Co-Authored-By: Codex XHigh <noreply@openai.com>
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Remove > AI refused whenever anything had Hermes's files open and told the user to close it and try again, and the thing open was Hermes: the agent in the terminal that choosing it as the default agent leaves running, the desktop app, a gateway. Those are the removal's to close. It now stops the gateway unit that upstream's `hermes gateway install` wrote, since that unit starts the runtime about to be deleted and would start it again the moment it was killed, then ends every process whose program lives in that runtime or in the package, and only then refuses over whatever is left, which is somebody else's: an editor on a skill, a shell sitting in ~/.hermes, a writer on the state database. Both are judged by the program, never by a later argument or by the home served, so an editor opened on a runtime file is the user's and a unit running a Hermes kept elsewhere is left alone whatever home it serves; for an interpreter the program is the script it runs, so a gateway started by hand as `python .../hermes gateway run` is found too. The refusal comes before anything is touched, so a run that stops leaves Hermes running as it was. A unit that will not stop still aborts the removal, as dropping the package would strand a live gateway on deleted code.
Co-Authored-By: Codex XHigh <noreply@openai.com>
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Resolve color references iteratively and use the caller's fallback when a reference repeats. Preserve normal palette roles, color parsing and gradient first stops.
Reported-by: Aleksej <aleksejhairov@yandex.ru>
The refusals that leave a self-installed Hermes alone came before the command was replaced only for a finished runtime. An unfinished one was still bootstrapped over a git status that could not be read, since a failed status read as a clean tree, and a half-built app beside it, or an edit the Linux runtime patch could not land on, was found only after the user's command had been saved aside and replaced and main switched. All three are asked first now, in both states, so a run that is going to stop leaves the launcher, the checkout and ~/.local/bin as they were.
Co-Authored-By: Codex XHigh <noreply@openai.com>
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Hermes is only ever installed through the app. Choosing it as the default agent used to stand aside for a hermes that worked but came from somewhere else, and to refuse one that predated seeded sessions; both left the machine on a Hermes that was not the app's, which is the one Omarchy prepares for in-app updates and hands the theme to. Now --check answers only for the app's own Hermes, and --now installs the app whatever answered to hermes before, saving the previous command aside as it always did for the app path. The desktop installer no longer adds the package itself, since the shared install does.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
The re-point of a user plugin link stranded by the elsewhen package moving from plugins/ to shell/plugins/ landed in migration 1789581661, which every machine updated between that migration shipping and the package moving had already applied. omarchy-migrate keys completion on the filename alone, so the repair never ran where it was needed. On a dev checkout the shell discovers the packaged plugin only through that link, and a rescan drops a dangling one, so Elsewhen vanished from the bar on the first shell start after the package upgrade.
Renaming the file runs the whole migration again everywhere. Each step is safe to repeat: the package add is a no-op once installed, both link branches are guarded, the rescan is best-effort, and the put keeps an existing placement. The new test holds a state directory with only the old marker and checks the renamed file is still pending, which the old name could not pass.
Whether the environment mise built is gone was read by searching the global listing for the prefix `"pipx:hermes-agent`, so a tool that merely starts the same way, `pipx:hermes-agent-tools` say, read as the retired one still requested. Removing the real one changed nothing, the recheck failed again, and the migration stayed pending on every update. The key is matched whole now, with or without its options.
Co-Authored-By: Codex XHigh <noreply@openai.com>
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
The wait before clearing a stale shallow.lock looked for a git whose command line began with `git`, so one started as `/usr/bin/git`, which is what a caller that resolved it with `which` runs, was never seen: its lock, once a minute old, would have been cleared under it and a second fetch started against the same shallow file. The path is allowed only ahead of the name, at the start of the command line, so a process that merely names git in an argument, an editor opened on /usr/bin/git from inside the runtime say, is not waited for.
Co-Authored-By: Codex XHigh <noreply@openai.com>
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Upstream's installer runs `npx playwright install chromium` for the browser tools, and npx asks before fetching a package it does not have. Over ssh, with no terminal, it goes ahead; in the floating terminal the menu opens for choosing Hermes it printed "Ok to proceed? (y)" and waited, so an install a user had every reason to walk away from sat there until someone typed y. The mise-built Hermes this replaces never asked anything. `--skip-setup` already answers the wizard the same way, and the app's own bootstrap never had a terminal to ask in.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
The 2026-09-19 revision of this migration, and a symlink then shipped under config/, pointed every install's ~/.config/omarchy/plugins/omacom.elsewhen at /usr/share/omarchy/plugins/omacom.elsewhen. elsewhen 1.0.0-2 moved to shell/plugins, so the link dangles, the shell lists the plugin as enabled but never loads it, and the bar carries an empty slot. The migration kept any existing link, resolving or not, so a rerun could not repair it. A link into /usr/share/omarchy that no longer resolves is Omarchy's own and is re-pointed; a link the user made is still left alone.
A bare `omarchy-shell shell rescanPlugins` exits 1 when no shell answers on the caller's tree, and omarchy-migrate runs migrations under `set -e`, so an update run from a TTY or over ssh, or one whose shell had gone down while the package replaced its QML, died at "omarchy-shell is not running" before its post-update hooks, shell restart and reboot prompt, and re-failed the same way every time until a shell could be asked. The rescan is now best-effort, like `omarchy-bar put` already is and like #11117 makes the plugin commands' closing rescan: the update restarts the shell once the migrations are through, and a session without one has no bar to place on. An unknown widget on a live shell still leaves the migration pending.
Choosing Hermes as the default agent built it through mise: a pipx environment with no checkout, so `hermes update` had nothing to move, and the only Hermes that could update itself was the one Hermes Desktop set up. Both paths now run the same setup. omarchy-install-hermes-cli installs the hermes-desktop package and runs upstream's installer from it, pinned to the packaged release and started on main, exactly as Install > AI did; omarchy-install-ai-hermes is that plus opening the app. The terminal, the default agent and the app share one runtime, and it updates itself.
--check answers whether --now has anything left to do, not merely whether a hermes runs: choosing Hermes from the menu asks first and opens a terminal only on a no, so a yes has to mean no minutes-long step would run where nobody can see it. With the app installed that means the runtime's own command, its completion marker and the seeded packaged app; a finished runtime whose command is gone, somebody else's, or its own but unable to run gets it back from upstream's path stage without bootstrapping again. Either way the command has to be the one PATH finds, because omarchy-agent runs bare `hermes` and Omarchy puts mise's shims ahead of ~/.local/bin; a command in the way is named rather than installed over. The modes are named outright because the app's launcher used to call this command with no arguments to reconcile a mise copy; a default of --now would turn every launch into an install. --check still refuses to run the retired wrapper, since running it built Hermes through mise, and a machine whose migration is pending can still have it on PATH.
Provisioning no longer writes the wrapper, Remove Preinstalls no longer looks for it, and the wrapper, the environment it built and what proves them Omarchy's are known to the installer alone: --retire-mise is the migration's whole job, and --now runs the same removal once the runtime installer has saved the wrapper aside, so a user who chose Hermes before their migration ran is not left with mise's shim answering `hermes`. Only the wrapper proves the environment is Omarchy's, at its path or in that saved copy, so the environment goes first and the wrapper last, judged by mise neither having it installed nor still requesting it; a removal that leaves either behind, or a listing that cannot be read, mise missing included, stops with the commands to finish by hand and leaves the migration pending. The migration that once installed the wrapper is kept as a no-op for late updaters, and one whose default agent was Hermes is told to choose it again.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Co-Authored-By: Codex XHigh <noreply@openai.com>
Keep inhibitor state in validated private directories and verify the recorded owner, PID, start time and launch token before signaling. Authenticate the held command before detaching and drop it back to the invoking user.
Serialize launch and cancellation, identify the child before publishing its state, and preserve caller-owned idle choices. Cover cross-account fallback state, process identity, cancellation, retry, and update-lock handling with isolated regressions.
